Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVSLI--NGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGE-SVFIATGVTSGELVDGVKFGYNICSTSSLIML--HNKVIKLQTIQNLC |
| 1NI9 Chain:A ((1-327)) | GHMRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGE---APMLYIGEKVGTGRGDAVDIAVDPIEGT------QANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAK--HDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLAGI-------------EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186906 for 2497 contacts (-74.9/contact) +
2D Compatibility (PS) -31198 + (NN) -13406 + (LL) 2128
1D Compatibility (HY) -25200 + (ID) 6450
Total energy: -261032.0 ( -104.54 by residue)
QMean score : 0.591
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