Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISVLGSTGSIGKKTVDLLLKRKEEYQVEALSTCSNFALLACQAKLLNARYVAISNKRFYKDLKESLLGTGIKVEVGTEGLMNV-ASLPVDLSVVAVVGIAGLEPVMHVIESGTKVIALANKESIVCGGKLLLKKTEEKNVQIVPIDSEHNAIFQVLQNGNKCVEKIILTASGGSFLNYSLEQLRNVTVGQALSHPTWNMGKKISVDSATMMNKALEIIEAHNLFNISPNRIEAIVHPESIIHGIVIYKDGFNFAVLAEADMAIPISYALSWPERSALSYKLDLTKQKLTFQEPDHKRFPALKLSMEVLNSSSPHTNSIVLNAANEVAVDKFLKSRIDFLEIIKVVKLTVENFDSYTDINSLSDIINIDLESRAIAKEIIKNKVLAYS |
3A06 Chain:B ((4-360)) | -RTLVILGATGSIGTQTLDVL-KKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFED-------SSINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEH-SKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEPE---VEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVALE-PFFLRTISLSFEDPDPEKYPAFFLLKEIKDSYALRT---AFNAADEVAVEAFLKGRIRFGGIHRVIEKTLEEFQGYPQPRTLDDVERIHFEAIKKAERVTEWLSST-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225159 for 3040 contacts (-74.1/contact) +
2D Compatibility (PS) -37994 + (NN) -8795 + (LL) 1180
1D Compatibility (HY) -30800 + (ID) 7400
Total energy: -308968.0 ( -101.63 by residue)
QMean score : 0.432
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