Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGLNCEKETAFAFVECGRKLGVNNIEVRIVHINEIIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKN-NLLDKFQEFLSQDKLVIGICNGCQILAKLIPEF-SN-------LALIRND-IGNYQCRWIKVKVSPQSSSVWLQDL---NELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 1KA9 Chain:H ((3-184)) | MKALLIDY-GSGNLRSAAKALEAAGFS-------VAVAQD------PKAHEEADLLVLPGQGHFGQVMR-------AFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGG-----AFAPLTGRHFYFANSYYGPLTP-------YSL--------GKGE-------------YEG--TPFTALLA-KENLLAPQFHPEKSGKAGLAFLALARRYF-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70240 for 1311 contacts (-53.6/contact) +
2D Compatibility (PS) -17834 + (NN) -3804 + (LL) 4728
1D Compatibility (HY) -2000 + (ID) 1700
Total energy: -90850.0 ( -69.30 by residue)
QMean score : 0.265
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