Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLELKNKISAEAPKTDPSLAGVAANAILDVLGAV-PSKPLRVQAELYKKESNNEEM-DHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRL--LDNKPGD-GSDTPP-TPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVK-----YAMQQKGVIIFGANTI-ILCTSLALVYLQDKAKFIVFFANSPFYITILVIASASLFAV-SPIFHII-KQFRDAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLEYSNDTHSNFALNAW-EAKDNFINIGEKVISRANKIESIINNRPLFIALLTSVVAAN-IAF-PLGLLAIDGINNVQKFYQNPLTHNVGLSL-FIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQERTNVLKDNHGKDA-KCISLTLEQVVVQSHNCKDIVYSIGE--- |
| 4DIM Chain:A ((3-400)) | --DNKRLLILGAGRGQLGLYKAAKELGIHTIAGTMPNAH-----KPCLNLADEISYMDISNPDEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLVGLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNENELKNALENLKLPVIVKATDLIYIAKKEEEAIDGFNETMNLTK-------RDYCIVEEFIEGYEFGAQAFVYKNDVLF-VMPHGDETYMSHTAVPVGHYVPLDVKDDIIEKTKT--EVKKAIKALGL-------NNCAVNVDMILKDNEVYIIE-LTGRVGA-----NCLPELVEINYGIEYYKMIASMAIS------ENPLVFWSQKSKENKAGLARMIIE------------------TEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQIIVKEETLDKCKDKLDVIINNINIILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 160549 for 2843 contacts (56.5/contact) +
2D Compatibility (PS) -36924 + (NN) 3789 + (LL) 5200
1D Compatibility (HY) 10000 + (ID) 1350
Total energy: 141264.0 ( 49.69 by residue)
QMean score : -0.023
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