Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MDIIKTIEEKIRGSIDVIDVDIIDESVKHADHYFSSSSMLPSHIKLVLISDNFAGMDSLKRHRLIYELLKSEIELIHAISLHLYTQSEYNLKNK
2KZ0 Chain:A ((1-76))
PGSMTVTQSQLELLIRNAFPEAEITVTSLVGD------------NNHYSIKVISSQFQGKSKLEQHRMIYKVLDGL--NIHAIQIQTGCK--------
General information:
TITO was launched using:
RESULT:
Template:
2KZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42688 for 414 contacts (-103.1/contact) +
2D Compatibility (PS) -7462 + (NN) 221 + (LL) 1272
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -52357.0 ( -126.47 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2KZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZ0-query.scw
PDB file :
Tito_Scwrl_2KZ0.pdb
: