Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDLLEGACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLD-LAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
4LTU Chain:B ((2-104))
-PSITFIHPDGRSEIVDAAIGDSAMFAALNHGIDSIVAECGGNAVCATCHVYVDDLWLAKLP---PVDANEDDLLDGTASDRLPNSRLSCQIKIAPELDGLVLRIPERQT----------
General information:
TITO was launched using:
RESULT:
Template:
4LTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70272 for 753 contacts (-93.3/contact) +
2D Compatibility (PS) -11287 + (NN) -6027 + (LL) 584
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -96602.0 ( -128.29 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_4LTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LTU-query.scw
PDB file :
Tito_Scwrl_4LTU.pdb
: