Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKL--GHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSIL--GFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMN-KYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
| 3SZ3 Chain:A ((6-339)) | -KPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDP-QALHEATLDALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYANDVNAGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDV-ENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIRNDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196005 for 2659 contacts (-73.7/contact) +
2D Compatibility (PS) -34411 + (NN) -11662 + (LL) 528
1D Compatibility (HY) -25600 + (ID) 6650
Total energy: -273800.0 ( -102.97 by residue)
QMean score : 0.511
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