Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVGRTVKVTQAVVDLKFEGELPRIFNALKSKLEYRGKE--LILEVSQHIGDNIVRCIAMDSTNGVSRNDEFVDTGAPISVPVGRSTLGRIFNVVGEVIDECGPLKGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFSVFAGVGERTREGNDLYHEMITSNVINVNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGSEISALLGRMPSAVGYQPTLATDMGAMQERIASTTSGSITSVQAIYVPADDLTDPAPAATFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSLQDIIAILGMDELSDEDKITVDRARKIQKFFSQPFHVAEVFTGMPGKFVSLSDTVSSFKGIVEGEYDHLPEAAFYMVGNIDEAIKKAELIKDETKVGAKS
2JJ1 Chain:K ((15-479))---GRIVAVIGAVVDVQFDEGLPPILNAL----EVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTK-QFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKD-ATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAE--------


General information:
TITO was launched using:
RESULT:

Template: 2JJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232696 for 3980 contacts (-58.5/contact) +
2D Compatibility (PS) -48989 + (NN) -10125 + (LL) 1152
1D Compatibility (HY) -57200 + (ID) 16550
Total energy: -364408.0 ( -91.56 by residue)
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2JJ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JJ1-query.scw
PDB file : Tito_Scwrl_2JJ1.pdb: