Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKTTKNLLITEINKILPEDSQNR-LISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILS--SLNEGSNK-RCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALY---NYGVNLGLIFQAKDDIRDYKQDEV--------------NNLMSML----SKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
1RQI Chain:B ((23-295)) | ----------------IAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALD-------------LDAEG---------------------KHVPLDALERIHRHKTGALIRAAVRLGAL--SAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDA-RQSLKQLAEQSLDTSALEALADYIIQRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146989 for 2061 contacts (-71.3/contact) +
2D Compatibility (PS) -26304 + (NN) -12180 + (LL) 4000
1D Compatibility (HY) -15600 + (ID) 5500
Total energy: -202573.0 ( -98.29 by residue)
QMean score : 0.555
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