Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSQEANSNSVEAQKLQQVDNITPSSEGLLQQMQSLEKRIKSLEVTNRVILGLFIGTLATAMTVGAGFAIAAAPIIAGSIVGGVLATVALVALGATVYRCRAQVEAGFRYAAEKTIKGVKYIGEKIKDSAIHTKDSVKEAVSSIGQVAREETSSVLKTMGHKLSGLG--ASMSNLDSIPYSIGLQDSMVVSKTEEKTKNFNSIKEMFVKEVFEDKAIDSSVLVKKIFSELKGKVLEKAYSVDGQQGFKKDQLINQLGQQADFVSKLSSKKLQNLLAQGDNNLYEIFSEHHDEIKRIVKEHKTEHNFSESLNRMAKRHDENRKDSTQSSLPRSNSLSSVRTDSTVNSVAELLNSEGHRKVRSSSKLLRWLPWNKVSKAPEEAANVKYQVLPESDILAREIGKRTFYGIPVPAEGVDKTVTVNPNLFRSNSPNSLYGSPVLTPAVLLQVPKSLSLGSLSSDSGMDSGPSTLEKQSLSPEDLAKARASLKNTGSLGKLVEQQPSASPPAVEDVSEDLEEDFKKDKPATTFSQLKAEKSGAEVSYL |
1I8T Chain:A ((1-367)) | ----------------------------------------------------------MYDYIIVGSG-------------LFGAVCANELKKLNKKVLVIEKRNHIG-GNAYTEDCEGIQIHKYGAH-IFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVG-----------EDLYQALIKGYTEKQWGRSAKE--LPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLE----------------GVDVKLGIDFLKDKDSLASKAHRIIY-------------TGPIDQYFDYRFGA--------------------------LEYRSLKFETERHEFPNFQGNAVINFTDANVPYTRIIEHKHFDYVETKH--------TVVTKEYPLEWKVGD------EPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYKYYDMHQVISAALYQVKNIMSTD--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42894 for 3001 contacts (14.3/contact) +
2D Compatibility (PS) -37277 + (NN) 5100 + (LL) 11996
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: 12463.0 ( 4.15 by residue)
QMean score : 0.166
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