Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAK--KLILDRIKIEIGQFIKGHKINR--IFIPENYYNLHSEPFPPTP----CCQLVTEAIVKIVDD-----------NPTIHLLSICGGLQGIMSAKGIEVVHVEN-------FVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKL--ELLGYKIA--AFSNDGVIEAIEDKHGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA------------------------ |
| 3TIJ Chain:A ((8-422)) | SLFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVSNVINYGNDGTSFLFGGLVS-GKMFEVFG-GGGFIFAFRVLPTLIFFSALISVLYYLGVMQWVIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLVVRPFVPKMTQSELFAVMCGGLASIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDKPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWLFAPLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIAGTLSNLMAATIAGFFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13357 for 2441 contacts (-5.5/contact) +
2D Compatibility (PS) -33256 + (NN) -4898 + (LL) 396
1D Compatibility (HY) -12400 + (ID) 2400
Total energy: -65915.0 ( -27.00 by residue)
QMean score : 0.112
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