Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSILSIIKK-HIDIQEKLDTYNGLLGVSVSIHGVVDNEQH-VTYLP-FHETE-GISIAKKIKEITNVPVVVENEANLSALYERNFNH-------------NLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNVEIFHKIEDIFSQEALLHNLSNQLNE--KMTLSKLIQFYN---EKN-PVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYS---RNEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
3MCP Chain:A ((4-321)) | -------------------------------------------------------------------YTNDNRIVMTLDAGGTNFVFSAIQGGKEIADPVVLPACADCLDKCLGNLVEGFKAIQA--GLPEAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLRNKK-----YPEYIVEESVSIRAVMRVYAERSGDAGARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLID-GLIVIGGGLSGASKYILPVLLKEMNAQTGMM----QKEVYDLDEEKSFAGFARGEAVE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161555 for 2189 contacts (-73.8/contact) +
2D Compatibility (PS) -30152 + (NN) -8243 + (LL) 5788
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -204112.0 ( -93.24 by residue)
QMean score : 0.410
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