Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MIMFVLCGFIFPLTVTALGQVLFPEQANGSLVKQDGKVIGSKLIGQQWTEPKYFHGRISAVNYNMNANEVKESGGPASGGSNYGNSNPELKKRVQETIKQEGKKISSDAVTASGSGLDPDITV----
1ZHS Chain:A ((1-113))
ASYKVNIPAG---PLWSNAEAQQVGPKIAAA----HQGNFTG------QWTTVVESAMSVVEVELQVENTGIHEFKTDVLAGPLW--SNDEAQKLGPQIAASYGAEFTGQWRTIV-EGVMSVIQIKYTF
General information:
TITO was launched using:
RESULT:
Template:
1ZHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5379 for 691 contacts (-7.8/contact) +
2D Compatibility (PS) -11268 + (NN) -1608 + (LL) 812
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -19393.0 ( -28.07 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHS-query.scw
PDB file :
Tito_Scwrl_1ZHS.pdb
: