Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKSIYNFQETNTNFLENLESLNDDNYELLNDKELVSDSNELKLISKVYIRKKDKKLLDWQLLIKNVYLDTEEDDNLFSESGHHFDAILFLKEDTTLQNNVYIIPFGQAYHDINNLIDYDF-GIDFAERAIKNEDIVNKNVNFFQQNRLKEIVNYRRNSVDYVRPSESYISVQGHPQNPQIFGKTMTCGTSISLRVPNRKQQFIDKISVIIKEINAIINLPQKISEFPRIVTLKDLNKIEVLDTLLLKKLSNSSTTENISIDISRFLELSNMILLLDDMLDVNIYINSFKNNTLETFDATDPEVDYITEIGDYLLKYDVNSINDVRI-EVIDNLGHSNNMLLKTILHAEVEMEDGKKYLLQNGKWGYFNR-EFFDL-LND-HLNEIEIR--YNTLTP-TGLVFKEGEEGYIKEIVGRLPEEYLMLHKKFIKPINKNFIVK----GNGIELADLYNIKNKELFTIKRGINTSLSLYS---LEQNIIAINALKYPE-SYNFEELIEAIPDNSENIFNDIQRSTNFSIVWILPISSIDNMPIKDMVHTSNVINKNFQLTNLGSVLLKNKLVEWSLYLK----DQRINPIIYMETPTEDRN |
| 4R7F Chain:A ((2-398)) | ---QVKFFTDVNSKQIKTLQVKVAG-----------------ELISEPYIALGGEE-----------------------QIEINFDGL-----GSGYTRYAYNVVHCNADWTQSQLSPIEYMN-----------GFQGTTIDDFANS---------------IGTTTQYSNYRLLLPNDDV---QFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPVVNISASVSGNTDI--------------------DTNQSHQQVSFNINN---KNFPITYPQTDLKIFVYQDNRRDN----------------------------AVTDLQPMSILEN---------------QISYTYNRNLIFPAGNE--YRRMEFLSNKYNGMHVENISFHNPYYNVELMTDYRRDKGTYQYDQDQDGR-------------------FFIRCSDCNDPDTEADYYIVH----FTLACDPLPDGSVYLNGELFNNVLDEKS----KMGYNFET------KQYEKAVLLKQGSYNYQYLFVPTGSSVG--------QTGPIEGNYYQTQN-----------EYSIYVYYRPMGARYDRLIGVTTVRN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4388 for 2950 contacts (-1.5/contact) +
2D Compatibility (PS) -39110 + (NN) 4992 + (LL) 15152
1D Compatibility (HY) -21600 + (ID) 3550
Total energy: -48504.0 ( -16.44 by residue)
QMean score : 0.111
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