Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFH----------EDETAKYIAEFYKGKDVEVETNVGPRGIKVTIDSG-KP-GKTLAIRADFDALPITED-------------------------------T-GLSFASQ----NKG-VMHACGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSP-HMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGV-TCTLEYNDDY-PA---LYNDPEFTEYVAKTLKEANLDFGVE-MCEPQPPSEDFAYYAK-ERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 3IFE Chain:A ((19-432)) | -----YFQSNAMKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIGR-GPAHFDVEA-F-GASFAYMMDGG---PLGGLEY--E--SFNAAGAKLTFNGTNTHPGTAKNKMRNATKLAMEFNGHLPVEEAPEYTEGYEGFYH-----L-LSLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS----LNIEPNIHPIRGGTDGSQLSYMGLPTPNI--FTGG-----ENYHGKFEYVSVDVMEKAVQVIIEIARRFEE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144216 for 2962 contacts (-48.7/contact) +
2D Compatibility (PS) -38633 + (NN) -21162 + (LL) 1232
1D Compatibility (HY) -800 + (ID) 2750
Total energy: -206329.0 ( -69.66 by residue)
QMean score : 0.452
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