Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNREMLYLNRSDIEQAGGNHSQVY--VDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISIMDVHK----EVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
2I99 Chain:A ((1-312)) | -SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMPAYSAAE-----DALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFS-FKEVRIWNRTKENAEKFADT-----VQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLL-------SGAEIFAELGEVIKGVKPAH--CEKTTVFKSLGMAVEDTVAAKLIYDSWSSG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141586 for 2731 contacts (-51.8/contact) +
2D Compatibility (PS) -32936 + (NN) -17693 + (LL) 1996
1D Compatibility (HY) -14000 + (ID) 3400
Total energy: -207619.0 ( -76.02 by residue)
QMean score : 0.437
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