Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQTLLIYERETQQIKIPVYFSALNMFRYESSQPITIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQLAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANIDELENLTVPIKEQATDMLNDQGLSIDDYVLFPVHPWQYQHILPNVFATEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTPTRYMKNGEQAEQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFK-DQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFE-DIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTLINEDLETFFAY----FQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILK---NEVATISWVTTDQLAVRHILFDKQTWPFKQILLPL---LYQRDSGGGSMPSGLTTVPNPMVTYD |
| 4U1F Chain:A ((17-496)) | -----PSSSLKSWLMDDKV------------RDQFVLQDDVKTSVFWN---------------SMFNEEDSLVESREN-WSTNYVRFSPKGTYLFSYH------------QQGVTAWGGPNFDRLRRFY---HPDVRNSSV-SPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIA------------SGLLMATFPVIKSP-------------YLKWPLVRWSYND---KYCARMVGDSLIVHDATKNFMPLEAKALK-------PSGIRDFSFAPEGV---KLQPFR---NGDEPSVLLAYWTPETNNSACTATIAEVPR-----GRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKS----------------GKTQFSNLQICRLTERDIPVEKVELKDSVFEFGWEP--HGNRFVTISVHEVADMNYAIPANTIRFYAP-ETKKRWSLVKEIPKT-FANTVSWSPAGRFVVVGALVGPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLVKEDIIAGFKNFAWRPRP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81138 for 3387 contacts (-24.0/contact) +
2D Compatibility (PS) -47253 + (NN) 11562 + (LL) 9980
1D Compatibility (HY) -9200 + (ID) 4200
Total energy: -120249.0 ( -35.50 by residue)
QMean score : 0.118
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