Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATN--RRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREFKEIENFKEIVYQ-GQIVMDRGYEEFIIASSAFKQNAPSFIIRGFGPHEEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVI----LTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF-------- |
| 2IUY Chain:A ((3-342)) | PLKVALVNIPLRVPGSDAWISVPP--------QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRTADVDVVHDH-------------------------SGGVIGPAGLPPGTAFISSHHFTTRPVNPVGCTYSSRAQRAHC---GGGDDAPVIPIPVDPARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHACGRR---LVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV--GEVVGYGTDFAPDEARRTLAGL----PASDEVRRAAVRLWGHVTIAERYVEQYRRLLAGATWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60136 for 2844 contacts (-21.1/contact) +
2D Compatibility (PS) -34426 + (NN) -7738 + (LL) 3156
1D Compatibility (HY) 4400 + (ID) 2600
Total energy: -97344.0 ( -34.23 by residue)
QMean score : 0.317
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