Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
4GMD Chain:A ((8-211))---FVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIG-----ARGR-LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERL


General information:
TITO was launched using:
RESULT:

Template: 4GMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69685 for 1485 contacts (-46.9/contact) +
2D Compatibility (PS) -21215 + (NN) -9320 + (LL) 960
1D Compatibility (HY) -10800 + (ID) 3800
Total energy: -113860.0 ( -76.67 by residue)
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4GMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GMD-query.scw
PDB file : Tito_Scwrl_4GMD.pdb: