Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFS-TFASKILHAEHIFVAGKGRSGFVANSFAMRLNQL-GKQAHVVGEST----TPAIKSNDVFVIISGSGSTEHLRLLADKAKSVGA-DIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1MOQ Chain:A ((37-182))
---------------------DLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTE----IGVASTKA--FTTQLTVLLMLVAKLSRL----------------
General information:
TITO was launched using:
RESULT:
Template:
1MOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75902 for 1137 contacts (-66.8/contact) +
2D Compatibility (PS) -15539 + (NN) -9618 + (LL) 4076
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -100283.0 ( -88.20 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_1MOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MOQ-query.scw
PDB file :
Tito_Scwrl_1MOQ.pdb
: