Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYK---SMPEHVNMMDKSMKHHIIIDQI-GDENKAILKDFLMNHDEGMWKLSSDALHQAFN |
3P9A Chain:A ((1-139)) | MAAPKGNRFWEARSSH--GRNPKFESPEALWAACCEYFEWVEANPLWEMKAFSYQGE-------------------------VIQEPIAKMRAMTITGLTLFIDVTLETWRTYRLREDLSEVVTRAEQVIYDQKFSGAAADLLNANIIARDLGLKEQSQVEDVTPD------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5626 for 803 contacts (-7.0/contact) +
2D Compatibility (PS) -14068 + (NN) 210 + (LL) 2712
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -19872.0 ( -24.75 by residue)
QMean score : 0.198
|
|
|