Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIA---EPVNIICTHGTMSIDKLDDMIESLY--DKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
2ZBK Chain:A ((202-280))
---AEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIFSVFRI--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24264 for 409 contacts (-59.3/contact) +
2D Compatibility (PS) -7758 + (NN) -1511 + (LL) 4480
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -31253.0 ( -76.41 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_2ZBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZBK-query.scw
PDB file :
Tito_Scwrl_2ZBK.pdb
: