Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIELKDLTIQKGNIHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYFNGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQLKIRYI-EQFGLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFDLVDENKVLILATHDMAIANQCDEIIDLEQYSKVASM
1VCI Chain:A ((13-182))-VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRN-ISMVFQ------HMTVYENIAFPL--KKFPKDEIDK-RVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAK-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50195 for 1039 contacts (-48.3/contact) +
2D Compatibility (PS) -16692 + (NN) -2619 + (LL) 5260
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -79246.0 ( -76.27 by residue)
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_1VCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VCI-query.scw
PDB file : Tito_Scwrl_1VCI.pdb: