Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
2FW6 Chain:B ((25-168))
--VGIIMGSQSDWETMRHADALLTELEIPHETLIVSANRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRA--------------
General information:
TITO was launched using:
RESULT:
Template:
2FW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125853 for 1251 contacts (-100.6/contact) +
2D Compatibility (PS) -15380 + (NN) -4581 + (LL) 1676
1D Compatibility (HY) -15200 + (ID) 4200
Total energy: -163538.0 ( -130.73 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_2FW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FW6-query.scw
PDB file :
Tito_Scwrl_2FW6.pdb
: