Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPLLSLKSVSKSYDDLNI--LDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGEVIYQNKPIGN-----LPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNIVEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFRGVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEEVDNA
1OXV Chain:D ((6-285))------VKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVV-IGSLRFPV---SVSSDRAI-IGIRPEDVKLSK--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166973 for 2076 contacts (-80.4/contact) +
2D Compatibility (PS) -29982 + (NN) -11543 + (LL) 6696
1D Compatibility (HY) -26400 + (ID) 5600
Total energy: -233802.0 ( -112.62 by residue)
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_1OXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXV-query.scw
PDB file : Tito_Scwrl_1OXV.pdb: