Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
2FAD Chain:B ((5-73))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN----
General information:
TITO was launched using:
RESULT:
Template:
2FAD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35136 for 452 contacts (-77.7/contact) +
2D Compatibility (PS) -7505 + (NN) -3621 + (LL) 680
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -54982.0 ( -121.64 by residue)
QMean score : 0.899
(partial model without unconserved sides chains):
PDB file :
Tito_2FAD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FAD-query.scw
PDB file :
Tito_Scwrl_2FAD.pdb
: