Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLY------EYQRTLENKTEC-----
2K9Q Chain:A ((1-77))
MELSNELKVERIRL--SLTAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLRSKGVDLNALFDRIIVNKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10023 for 300 contacts (33.4/contact) +
2D Compatibility (PS) -6972 + (NN) -1544 + (LL) 228
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -165.0 ( -0.55 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2K9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9Q-query.scw
PDB file :
Tito_Scwrl_2K9Q.pdb
: