Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
2OXP Chain:A ((9-141)) | ---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPET------VEKYGPEASAFTKKMDENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3114 for 991 contacts (3.1/contact) +
2D Compatibility (PS) -13339 + (NN) -4115 + (LL) 3536
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -22904.0 ( -23.11 by residue)
QMean score : 0.552
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