Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPV-AITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHESNLLK-HNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
| 3QHA Chain:A ((11-185)) | QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEAGAT--LADSVAD-VAAADLIHITVLDDAQVREVVGELAG-HAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDA-PVSGGAAA----A----ARGELATMVGAD--R-EVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98813 for 1520 contacts (-65.0/contact) +
2D Compatibility (PS) -18921 + (NN) -10490 + (LL) 13188
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -119286.0 ( -78.48 by residue)
QMean score : 0.468
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