Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTDLLNQMNIQTTTVDD-TPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVG-VFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYV------AEKVDTIAEGIELATTLIDNGEALKKYHQMRGE |
| 4N5V Chain:B ((102-356)) | ------------------------------------------------------------------------AVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAF--ADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAA-GSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGA-RGPVRDAVVLNAAGAIVAHAGLSSAEWLPAWEEGLRRASAAIDTGAA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102163 for 2161 contacts (-47.3/contact) +
2D Compatibility (PS) -25959 + (NN) -8905 + (LL) 6504
1D Compatibility (HY) -11200 + (ID) 4250
Total energy: -145973.0 ( -67.55 by residue)
QMean score : 0.391
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