Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3F0U Chain:X ((1-157))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLYEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3F0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120605 for 1164 contacts (-103.6/contact) +
2D Compatibility (PS) -16651 + (NN) -3206 + (LL) 272
1D Compatibility (HY) -24000 + (ID) 7800
Total energy: -171990.0 ( -147.76 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3F0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0U-query.scw
PDB file :
Tito_Scwrl_3F0U.pdb
: