Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEY--NHKIAHGHAVMIGIIYQFIVANILFNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK----- |
| 1UJN Chain:A ((1-347)) | MQRLEVREPVPYPILVGEGVLKEVPPLAGP---AALLFDRRVEGFAQEVAKALGV---RHLLGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYLRGVAYLAFPTTTLAIVDASVGGKTGINLPEGKNLVGAFHFPQGVYAELRALKTLPLPTFKEGLVEAFKHGLIAGDEALLKVEDLTPQSPR------LEAFLARAVAVKVRVTEEDPLEKGKRRLLNLGHTLGHALEAQTRHALPHGMAVAYGLLYAALLGRAL-GGEDLLPPVRRLLLWLSPP--PLPPLAFEDLLPYLSLH---------WVVPLAPGRLVVRPLPEGLLREAFAAWREELKGLGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255174 for 2808 contacts (-90.9/contact) +
2D Compatibility (PS) -34623 + (NN) -4225 + (LL) 1192
1D Compatibility (HY) -25200 + (ID) 5350
Total energy: -323380.0 ( -115.16 by residue)
QMean score : 0.493
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