Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQ-FGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDK--RRGKLTISKKWDQTTAILTGNFLLALGLE-----HLMAVKDNRVHQLISE-----SIVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHY---IGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 1RQJ Chain:A ((43-258)) | --------------------------------------GGKRLRPFLVYATGHMFGVSTNTLDAP---AAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAE--GKHVPLDALERIHRHKTGALIRAAVRLGAL-SAGDKGR-RALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQ--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10304 for 1522 contacts (-6.8/contact) +
2D Compatibility (PS) -20830 + (NN) -4842 + (LL) 8944
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -42282.0 ( -27.78 by residue)
QMean score : 0.247
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