Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINK-SVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDD--RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAV-MSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQ-FNTKHLLEIVDLFYSRDH |
| 2FOR Chain:B ((31-322)) | -----LEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVV-----------------KSTYPALLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103024 for 2314 contacts (-44.5/contact) +
2D Compatibility (PS) -29211 + (NN) -15615 + (LL) 492
1D Compatibility (HY) -15200 + (ID) 5500
Total energy: -168058.0 ( -72.63 by residue)
QMean score : 0.499
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