Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
2QTN Chain:B ((1-188))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
2QTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151082 for 1462 contacts (-103.3/contact) +
2D Compatibility (PS) -20081 + (NN) -5847 + (LL) 44
1D Compatibility (HY) -18800 + (ID) 3500
Total energy: -199266.0 ( -136.30 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_2QTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTN-query.scw
PDB file :
Tito_Scwrl_2QTN.pdb
: