Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASA-VLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK--------
2D7E Chain:A ((1-105))
MPVAHVALPVP-------LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD---ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR
General information:
TITO was launched using:
RESULT:
Template:
2D7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10673 for 519 contacts (20.6/contact) +
2D Compatibility (PS) -10687 + (NN) -6436 + (LL) 672
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -8978.0 ( -17.30 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_2D7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D7E-query.scw
PDB file :
Tito_Scwrl_2D7E.pdb
: