Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHV-IFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVAS--VASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
4G4O Chain:A ((1-273)) | -PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDS----------EAFAARMIGQTVRGLERRGKFLKFLLDRD----ALISHLRAEGRYAVASALEPL-----EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRS--VKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVM---------------------HLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132159 for 1981 contacts (-66.7/contact) +
2D Compatibility (PS) -25978 + (NN) -5705 + (LL) 2352
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -184690.0 ( -93.23 by residue)
QMean score : 0.429
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