Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQQQNDKRTLKNKHTYQNEPLPNRKDFVVSFITGALVGSALGLYFKNKVYQKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAALKAQQAAIKEEASANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNEESKASALKVQQAAIKEEASANNLSDTSQEAQEIQEAKKEAQAETDKSAAVSNEEPKAVALKAQQAAIKEEASANNL----SDTSQEAQEVQEAKKEAQAEKDSDTSTKDASAAKVEVSKPESQAERLANAAKQKQAKLTPGSKESQLTEALFAEKP-VAKNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFENGVITRKADEKTTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHNKKSSQGAKKQSSSSKLTQKNNQTSNKNSKTTNAKSSNASKTPNAKVEKANSKIEKRTFND |
| 1CPO Chain:? ((123-299)) | ---------------------------------------------------------------------------------------------------------------NSNDFIDNRNFDAETFQTSLDVVAGKTHF-----DYADMNEIRLQRESLSNELDFPGWFTESKPIQNVESGFIFALV-SDFNLPDNDENPL-VRIDWWKYWFTNESFPYHLGWHPPSPAREIEFVTSASSAVLAASVTSTPSSLPSGAI----GPGAEAVPLSFASTMTPFLLATNAP-------YYAQDPTLGPND----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 152710 for 1057 contacts (144.5/contact) +
2D Compatibility (PS) -18135 + (NN) -2955 + (LL) 16524
1D Compatibility (HY) 3200 + (ID) 450
Total energy: 150894.0 ( 142.76 by residue)
QMean score : 0.262
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