Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD--------HIAGRIEA-GK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGT----LDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGM-DPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQY----G--FEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNL-DKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 3GB0 Chain:A ((4-372)) | --------NQERLVNEFMELVQVDSETK------------FEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGN-----GIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERIT------AKYGY-ALDSDG-----------------------------------KV------------GEI--------------VVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRID------------------------SETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRTPSLHQSGGGSDANVIAGHGIPTVNLAVG-YEEIHTTNEKIPVEELAKTAELVVAIIEEVA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122287 for 2952 contacts (-41.4/contact) +
2D Compatibility (PS) -38079 + (NN) -16508 + (LL) 7948
1D Compatibility (HY) -800 + (ID) 2950
Total energy: -172676.0 ( -58.49 by residue)
QMean score : 0.343
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