Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFSEIES-EYKMSREEILILLTLWQKG--SMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
2FRH Chain:A ((9-125))
-----------------------------------------INDCFELLSMVTYA-DKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEI----------
General information:
TITO was launched using:
RESULT:
Template:
2FRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46545 for 735 contacts (-63.3/contact) +
2D Compatibility (PS) -12396 + (NN) -2058 + (LL) 4500
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -64399.0 ( -87.62 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2FRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FRH-query.scw
PDB file :
Tito_Scwrl_2FRH.pdb
: