Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGS-WNLGEPPHEGTQKILNKHNIPFDGMISELF-EATDDFDYIVAMDQSNVDNIKSIN---PNLKGQLFKLLEFSNMEESDVPDPYYTN--NFEGVYDMVLSSCDNLIDYIVKDANLKEG
1C0E Chain:A ((8-156))
---VLFVCLGNICRAPIAEAVFRKLVTDQNISDNWVIDSGAVSDWNVGRSPDPRAVSCLRNHGINTAHKARQVTKEDFVTFDYILCMDESNLRDLNRKSNQVKNCRAKIELLGSYDPQKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKV---------
General information:
TITO was launched using:
RESULT:
Template:
1C0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81478 for 1164 contacts (-70.0/contact) +
2D Compatibility (PS) -15197 + (NN) -7082 + (LL) 740
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -117917.0 ( -101.30 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1C0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C0E-query.scw
PDB file :
Tito_Scwrl_1C0E.pdb
: