Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIE-----QLKMVDSNPTQTAEQRRELING----VFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDGS-------VRNDLVQLQRKFRRVN---- |
| 2UXU Chain:A ((5-210)) | TKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHH-KCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53176 for 1254 contacts (-42.4/contact) +
2D Compatibility (PS) -18814 + (NN) -4970 + (LL) 132
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -81228.0 ( -64.78 by residue)
QMean score : 0.383
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