Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVIGANGGVGSLLVQQLAKEN-VPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGK-IEAAQYFDGKGEIPREDVATVLKEIVTSN-HFNHQEFQIISGE-QDIKDALTQFEIEKD
3QVO Chain:A ((24-234))
KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLN-HAA-LKQAMQGQDIVYANLTGED----------LDIQANSVIAAMKACDVKRLIFVLSLG-----------IGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDKPFFM-------
General information:
TITO was launched using:
RESULT:
Template:
3QVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85024 for 1527 contacts (-55.7/contact) +
2D Compatibility (PS) -20786 + (NN) -7775 + (LL) 1352
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -122283.0 ( -80.08 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3QVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QVO-query.scw
PDB file :
Tito_Scwrl_3QVO.pdb
: