Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVE---DPYDYESYEKLLKDKIK
3H93 Chain:A ((17-184))
-----------------------SPVPVSQPGKIEVVELFWYGCPHCYAFEPTI-VPWSEKLP--ADVHFVRLPALFGG-IWNVHGQMFLTLES--MGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDK---EKFLSTYNSF--AIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIE
General information:
TITO was launched using:
RESULT:
Template:
3H93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18341 for 1236 contacts (-14.8/contact) +
2D Compatibility (PS) -18095 + (NN) -10548 + (LL) 3052
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -50232.0 ( -40.64 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3H93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H93-query.scw
PDB file :
Tito_Scwrl_3H93.pdb
: