Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGKSITCKSIIGLNPERLGVTGEIIFDGTSMLSLSESQRKKYRGKDIAMVMQQGSRAFDPSTTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLMIALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIADRVVVMKNGQLIEHGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD |
| 4YMV Chain:A ((20-237)) | -----------------------VTLKVNKGEVVVIIGPSGSGKSTLLRCI---NLLEEPTKGEVFIDGVK-INNGKVNINKVRQK-VGMVFQHFN-LFPHLTAIENITLAPVKVK-KMNKKEAEELAVDLLAKVGLLDKK---DQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLS------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99165 for 1741 contacts (-57.0/contact) +
2D Compatibility (PS) -23531 + (NN) -9311 + (LL) 3892
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -148115.0 ( -85.07 by residue)
QMean score : 0.520
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