Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAV-----DIAEAVSETVDKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQGGSIVNTSSFSG----QAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
4BMS Chain:K ((2-246)) | -YRLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEI-------GRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQK-TLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRD-GGSVILTSSVAGVLGLQAHDTY----SAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEE--ADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87231 for 1993 contacts (-43.8/contact) +
2D Compatibility (PS) -25495 + (NN) -6993 + (LL) 1828
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -137141.0 ( -68.81 by residue)
QMean score : 0.481
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