Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKT------ITYYTVPHAP-AQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQL-------------------EHIPFK-N---VCQAVVYISGQKKGDVVTHFR-DYQLRIQDNA-----LTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIM-HNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMYYDIVHQQ-PLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
| 3GHY Chain:A ((1-320)) | LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSG--EARSAVTRQLGAFKTSMLQ-----RGPLEIDALVASVREIGLHVGVPTPQIDTLLGLVRLHAQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194493 for 2255 contacts (-86.2/contact) +
2D Compatibility (PS) -29722 + (NN) -5936 + (LL) 728
1D Compatibility (HY) -14800 + (ID) 2850
Total energy: -247073.0 ( -109.57 by residue)
QMean score : 0.483
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