Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVT--TGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVG---IVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF--------------------------------------------------------- |
1QLT Chain:A ((274-560)) | GGYQSYLITLPKDGDLKQAVDIIRPLRLGMAL-QNVPTIRHILLDAAVLGDKRSYSSRTEPLSDEELDKIAKQL---NLGRWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLPNGAALFFSPIAKVSGEDAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYSHVTWKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99070 for 1666 contacts (-59.5/contact) +
2D Compatibility (PS) -22632 + (NN) 1470 + (LL) 460
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -122722.0 ( -73.66 by residue)
QMean score : 0.139
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