Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSAHFLKIVFLVGMCVSSLFAEGLEGFFNALEAQLKSPIAKGILMVIFIGIAIYVWRNLDRWKEILFTILGVVFGIFLFFKAPSLANWFMGVF------
2E5G Chain:A ((58-151))
GSSGSSGLRSVFVSGF-PRGVDSAQLSEYFLAF-----GPVASVVMDKDKGVFAIVEMGDVGAREAVLSQSQHSLGGHRLRVR-PREQKEFQSPASKSPKG
General information:
TITO was launched using:
RESULT:
Template:
2E5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79187 for 540 contacts (-146.6/contact) +
2D Compatibility (PS) -8958 + (NN) 2473 + (LL) 808
1D Compatibility (HY) 800 + (ID) 800
Total energy: -84864.0 ( -157.16 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_2E5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5G-query.scw
PDB file :
Tito_Scwrl_2E5G.pdb
: