Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQ--------SGAKVLLALKGYAFWREFGILRQKL----NGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSA---ILPLA--TSIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKE---HGL-EGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPY---LE-NMAWVNFGGGHHITRS--------DYDVNLLIQTIKDFKER------YHNTEVILEPGEAIGWQCGFLIASVIDIVQ-ND-------------------------------------------------------------------------------QEIAILDASFSAHMPDCLEMPY-RPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMG--S---FSFETPL---KRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKID--SQ--GFKILKS-FSYEDYKNRN |
3NZP Chain:A ((41-562)) | ----DGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY--NN-EGAPITVNGF-KDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKER-------FKPKPNIGLRVRLHSA--------------KFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGEVQERYLVNFSLFQSMPDFWGLEQNFPIM-PLDRL-----------DEEPTRSASIWDITCDSDGEISYSKDKPLFLH-DVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182814 for 2887 contacts (-63.3/contact) +
2D Compatibility (PS) -38332 + (NN) -2766 + (LL) 2796
1D Compatibility (HY) -12800 + (ID) 3000
Total energy: -236916.0 ( -82.06 by residue)
QMean score : 0.473
|
|
|